BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014F04SP1|AL426711
(765 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1478 1516 0.0
>3x_Contig1478
Length = 9651
Score = 1516 bits (765), Expect = 0.0
Identities = 765/765 (100%)
Strand = Plus / Minus
Query: 1 gatcaaaaataaagggtgaaagtatttgatctatccaatgatactacgagtcaatggtca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7479 gatcaaaaataaagggtgaaagtatttgatctatccaatgatactacgagtcaatggtca 7420
Query: 61 aattcatgaatatacagcgtaataagaatggattaagactctgtctttactttattacct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7419 aattcatgaatatacagcgtaataagaatggattaagactctgtctttactttattacct 7360
Query: 121 ttccttatttcatgagagagtcgaatcgtacagatatcttgcagaataatccatcttttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7359 ttccttatttcatgagagagtcgaatcgtacagatatcttgcagaataatccatcttttg 7300
Query: 181 aatttcaaatagatgcttgtttgcttgcttgctcttgccattctaacctttgttatccgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7299 aatttcaaatagatgcttgtttgcttgcttgctcttgccattctaacctttgttatccgg 7240
Query: 241 gtaatgatggaattgcgattttgacatatggacgtgtagttttttcttttttaaaaattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7239 gtaatgatggaattgcgattttgacatatggacgtgtagttttttcttttttaaaaattt 7180
Query: 301 taatgcaaattgtaacattaagctcatctcatctcatctcatctagtgtagttcaatact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7179 taatgcaaattgtaacattaagctcatctcatctcatctcatctagtgtagttcaatact 7120
Query: 361 agagatagtaggttaagtggttataaaatcccctgaatattagatactactgctgagttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7119 agagatagtaggttaagtggttataaaatcccctgaatattagatactactgctgagttt 7060
Query: 421 ggtttactccgttagagattattcgcattaccagttgcaaaacatcaaacgttgagtaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7059 ggtttactccgttagagattattcgcattaccagttgcaaaacatcaaacgttgagtaat 7000
Query: 481 tgacgatgggcaaaagaaggttttcaaacgagcatgtgtctgctgttgagacttctattc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6999 tgacgatgggcaaaagaaggttttcaaacgagcatgtgtctgctgttgagacttctattc 6940
Query: 541 cggagcatgcagctgaaatcgcagaaaaattaaccaaagatcaccctccaccagcagcag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6939 cggagcatgcagctgaaatcgcagaaaaattaaccaaagatcaccctccaccagcagcag 6880
Query: 601 agcctttaattcatcatgattctggtgagttcagcgggatgcaacgccatcacactactg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6879 agcctttaattcatcatgattctggtgagttcagcgggatgcaacgccatcacactactg 6820
Query: 661 cggccgatgccgaaagattggaaaatggatcagttaatccattcactggtggctcactat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6819 cggccgatgccgaaagattggaaaatggatcagttaatccattcactggtggctcactat 6760
Query: 721 cagagaaatatttcggtattctaaaggtaagaagagacttgccag 765
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6759 cagagaaatatttcggtattctaaaggtaagaagagacttgccag 6715
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7882
Number of Sequences: 1807
Number of extensions: 7882
Number of successful extensions: 506
Number of sequences better than 1.0e-20: 1
length of query: 765
length of database: 10,358,551
effective HSP length: 16
effective length of query: 749
effective length of database: 10,329,639
effective search space: 7736899611
effective search space used: 7736899611
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)